taxonomy

Info

Full Name	taxonomy
Version	4.0.0
Direct download (.csv + .md)	.tar.gz
Origin	.rdf.xz

CSV File Structure

Column Number	Column Type	Column Description
1	int	The tail of the edge
2	int	The head of the edge
3	str	The label of the edge

Graph Statistics

Num Nodes	Num Edges
5728398	14922125

Edges Statistics

Edge Label	Num Edge Label
type	2508635
partOfLineage	2441076
subClassOf	2112637
scientificName	2112637
narrowerTransitive	2112633
rank	1882006
otherName	889344
obsolete	328439
seeAlso	145407
depiction	56228
height	56169
width	56169
replaces	53962
replacedBy	53962
commonName	41607
mnemonic	26101
name	17833
strain	11389
synonym	9457
host	6433
imports	1

Canonical grammars

Nested parentheses grammars introduced in "Context-Free Path Queries on RDF Graphs". Template for these grammars is described on the Nested Parentheses page.

\[\begin{split}S \, \rightarrow \, \overline{subClassOf} \, S \, subClassOf \, \mid \, \overline{subClassOf} \, subClassOf \, \\ S \, \rightarrow \, \overline{type} \, S \, type \, \mid \, \overline{type} \, type \, \\\end{split}\]

Pyformlang CFG:

S -> subClassOf_r S subClassOf | subClassOf_r subClassOf
S -> type_r S type | type_r type

---

\[\begin{split}S \, \rightarrow \, \overline{subClassOf} \, S \, subClassOf \, \mid \, \overline{subClassOf} \, subClassOf \, \\\end{split}\]

Pyformlang CFG:

S -> subClassOf_r S subClassOf | subClassOf_r subClassOf

---

\[\begin{split}S \, \rightarrow \, \overline{type} \, S \, type \, \mid \, \overline{type} \, type \, \\\end{split}\]

Pyformlang CFG:

S -> type_r S type | type_r type